Jean-David Rochaix
Jean-David Rochaix was a Full Professor at the Department of Molecular Biology, University of Geneva from 1979-2010.
2024
RESISTANCE TO PHYTOPHTHORA1 promotes cytochrome b559 formation during early photosystem II biogenesis in Arabidopsis.
Thylakoid protein FPB1 synergistically cooperates with PAM68 to promote CP47 biogenesis and Photosystem II assembly.
The translocon protein FtsHi1 is an ATP-dependent DNA/RNA helicase that prevents R-loop accumulation in chloroplasts.
Identification of bZIP Transcription Factors That Regulate the Development of Leaf Epidermal Cells in Arabidopsis thaliana by Single-Cell RNA Sequencing.
2023
Architecture of chloroplast TOC-TIC translocon supercomplex.
2022
Reminiscences of Robert Paul Levine (1927-2022).
Chloroplast protein import machinery and quality control.
Retrograde and anterograde signaling in the crosstalk between chloroplast and nucleus.
The plastid-encoded protein Orf2971 is required for protein translocation and chloroplast quality control.
Identification of novel regulators required for early development of vein pattern in the cotyledons by single-cell RNA-sequencing.
Rational design of geranylgeranyl diphosphate synthase enhances carotenoid production and improves photosynthetic efficiency in Nicotiana tabacum.
Stromal Protein Chloroplast Development and Biogenesis1 Is Essential for Chloroplast Development and Biogenesis in Arabidopsis thaliana.
COE2 Is Required for the Root Foraging Response to Nitrogen Limitation.
2021
Erratum to: Functional redox links between lumen thiol oxidoreductase1 and serine/threonine-protein kinase STN7.
The DnaJ proteins DJA6 and DJA5 are essential for chloroplast iron-sulfur cluster biogenesis.
Functional redox links between lumen thiol oxidoreductase1 and serine/threonine-protein kinase STN7.
Regulated Chloroplast Gene Expression in Chlamydomonas.
2020
Coexpressed subunits of dual genetic origin define a conserved supercomplex mediating essential protein import into chloroplasts.
F-Type ATP Synthase Assembly Factors Atp11 and Atp12 in Arabidopsis.
Global Dynamic Molecular Profiling of Stomatal Lineage Cell Development by Single-Cell RNA Sequencing.
WRKY33-PIF4 loop is required for the regulation of H(2)O(2) homeostasis.
mTERF8, a Member of the Mitochondrial Transcription Termination Factor Family, Is Involved in the Transcription Termination of Chloroplast Gene psbJ.
COE 1 and GUN1 regulate the adaptation of plants to high light stress.
2019
Dynamic Modeling of a 100-Million-Atom Organelle at the Source of Life.
PPR Protein BFA2 Is Essential for the Accumulation of the atpH/F Transcript in Chloroplasts.
LHC-like proteins involved in stress responses and biogenesis/repair of the photosynthetic apparatus.
OHP1, OHP2, and HCF244 Form a Transient Functional Complex with the Photosystem II Reaction Center.
2018
Nucleus-Encoded Protein BFA1 Promotes Efficient Assembly of the Chloroplast ATP Synthase Coupling Factor 1.
Singlet oxygen-triggered chloroplast-to-nucleus retrograde signalling pathways: An emerging perspective.
Klaus Apel (1942-2017): a pioneer of photosynthesis research.
Specific labeling of mitochondria of Chlamydomonas with cationic helicene fluorophores.
2017
Chloroplast signaling and quality control.
The Pyrenoid: An Overlooked Organelle Comes out of Age.
A Light Harvesting Complex-Like Protein in Maintenance of Photosynthetic Components in Chlamydomonas.
2016
Loss of algal Proton Gradient Regulation 5 increases reactive oxygen species scavenging and H(2) evolution.
Chloroplast retrograde signal regulates flowering.
DEG9, a serine protease, modulates cytokinin and light signaling by regulating the level of ARABIDOPSIS RESPONSE REGULATOR 4.
Activation of the Stt7/STN7 Kinase through Dynamic Interactions with the Cytochrome b6f Complex.
2015
Conditional repression of essential chloroplast genes: Evidence for new plastid signaling pathways.
Controlling expression of genes in the unicellular alga Chlamydomonas reinhardtii with a vitamin-repressible riboswitch.
2014
RHON1 mediates a Rho-like activity for transcription termination in plastids of Arabidopsis thaliana.
Loss of chloroplast ClpP elicits an autophagy-like response in Chlamydomonas.
Repressible chloroplast gene expression in Chlamydomonas: a new tool for the study of the photosynthetic apparatus.
Conditional Depletion of the Chlamydomonas Chloroplast ClpP Protease Activates Nuclear Genes Involved in Autophagy and Plastid Protein Quality Control.
Short-term acclimation of the photosynthetic electron transfer chain to changing light: a mathematical model.
Regulation and dynamics of the light-harvesting system.
Separation of membrane protein complexes by native LDS-PAGE.
Chloroplast unfolded protein response, a new plastid stress signaling pathway?
Tools for regulated gene expression in the chloroplast of Chlamydomonas.
2013
Plant science. Fine-tuning photosynthesis.
Redox regulation of thylakoid protein kinases and photosynthetic gene expression.
Surprising roles for bilins in a green alga.
Repression of essential chloroplast genes reveals new signaling pathways and regulatory feedback loops in chlamydomonas.
2012
Protein kinases and phosphatases involved in the acclimation of the photosynthetic apparatus to a changing light environment.
Identification of an OPR protein involved in the translation initiation of the PsaB subunit of photosystem I.
Retrograde signaling and photoprotection in a gun4 mutant of Chlamydomonas reinhardtii.
Identification of a photosystem II phosphatase involved in light acclimation in Arabidopsis.
2011
The phosphorylation status of the chloroplast protein kinase STN7 of Arabidopsis affects its turnover.
Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).
Reprint of: Regulation of photosynthetic electron transport.
Enhanced chloroplast transgene expression in a nuclear mutant of Chlamydomonas.
Assembly of the photosynthetic apparatus.
Regulation of photosynthetic electron transport.
2010
State transitions at the crossroad of thylakoid signalling pathways.
Stt7-dependent phosphorylation during state transitions in the green alga Chlamydomonas reinhardtii.
The PPH1 phosphatase is specifically involved in LHCII dephosphorylation and state transitions in Arabidopsis.
2009
Phosphorylation of photosystem II controls functional macroscopic folding of photosynthetic membranes in Arabidopsis.
Biochemical and structural studies of the large Ycf4-photosystem I assembly complex of the green alga Chlamydomonas reinhardtii.
Factors effecting expression of vaccines in microalgae.
Analysis of the chloroplast protein kinase Stt7 during state transitions.
2008
Redundant cis-acting determinants of 3' processing and RNA stability in the chloroplast rbcL mRNA of Chlamydomonas.
2007
Potential for hydrogen production with inducible chloroplast gene expression in Chlamydomonas.
Role of thylakoid protein kinases in photosynthetic acclimation.
Loss of phylloquinone in Chlamydomonas affects plastoquinone pool size and photosystem II synthesis.
2006
ATAB2 is a novel factor in the signalling pathway of light-controlled synthesis of photosystem proteins.
One of two alb3 proteins is essential for the assembly of the photosystems and for cell survival in Chlamydomonas.
A novel multifunctional factor involved in trans-splicing of chloroplast introns in Chlamydomonas.
2005
State transitions and light adaptation require chloroplast thylakoid protein kinase STN7.
The FLP proteins act as regulators of chlorophyll synthesis in response to light and plastid signals in Chlamydomonas.
2004
Post-transcriptional steps involved in the assembly of photosystem I in Chlamydomonas.
Efficient assembly of photosystem II in Chlamydomonas reinhardtii requires Alb3.1p, a homolog of Arabidopsis ALBINO3.
Genetics of the biogenesis and dynamics of the photosynthetic machinery in eukaryotes.
A multiprotein complex involved in chloroplast group II intron splicing.
2003
Tab2 is a novel conserved RNA binding protein required for translation of the chloroplast psaB mRNA.
Expression and RNA binding properties of the chloroplast ribosomal protein S1 from Chlamydomonas reinhardtii.
Role of chloroplast protein kinase Stt7 in LHCII phosphorylation and state transition in Chlamydomonas.
Multiple translational control sequences in the 5' leader of the chloroplast psbC mRNA interact with nuclear gene products in Chlamydomonas reinhardtii.
2002
Chlamydomonas, a model system for studying the assembly and dynamics of photosynthetic complexes.
Light activates binding of membrane proteins to chloroplast RNAs in Chlamydomonas reinhardtii.
The ferredoxin docking site of photosystem I.
Loss of Albino3 leads to the specific depletion of the light-harvesting system.
Characterization of Tbc2, a nucleus-encoded factor specifically required for translation of the chloroplast psbC mRNA in Chlamydomonas reinhardtii.
Involvement of state transitions in the switch between linear and cyclic electron flow in Chlamydomonas reinhardtii.
The three genomes of Chlamydomonas.
2001
Functional studies of Ycf3: its role in assembly of photosystem I and interactions with some of its subunits.
Assembly,function, and dynamics of the photosynthetic machinery in Chlamydomonas reinhardtii.
Plant Physiol,
2001 Dec;
127
(4): 1394-1398
The flanking regions of PsaD drive efficient gene expression in the nucleus of the green alga Chlamydomonas reinhardtii.
Identification of an RNA-protein complex involved in chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii.
Posttranscriptional control of chloroplast gene expression. From RNA to photosynthetic complex.
2000
Characterization of Mbb1, a nucleus-encoded tetratricopeptide-like repeat protein required for expression of the chloroplast psbB/psbT/psbH gene cluster in Chlamydomonas reinhardtii.
The Nac2 gene of Chlamydomonas encodes a chloroplast TPR-like protein involved in psbD mRNA stability.
Stability determinants in the chloroplast psbB/T/H mRNAs of Chlamydomonas reinhardtii.
Limitation in electron transfer in photosystem I donor side mutants of Chlamydomonas reinhardtii. Lethal photo-oxidative damage in high light is overcome in a suppressor strain deficient in the assembly of the light harvesting complex.
1999
A factor related to pseudouridine synthases is required for chloroplast group II intron trans-splicing in Chlamydomonas reinhardtii.
Isolation and characterization of photoautotrophic mutants of Chlamydomonas reinhardtii deficient in state transition.
Plants, their organelles, viruses and transgenes reveal the mechanisms and relevance of post-transcriptional processes. Leysin, VD, Switzerland, February 25-28, 1999.
Site-directed mutagenesis of the PsaC subunit of photosystem I. F(b) is the cluster interacting with soluble ferredoxin.
Lys35 of PsaC is required for the efficient photoreduction of flavodoxin by photosystem I from Chlamydomonas reinhardtii.
Identification of cis-acting RNA leader elements required for chloroplast psbD gene expression in Chlamydomonas.
A large fraction of PsaF is nonfunctional in photosystem I complexes lacking the PsaJ subunit.
Photosystem I is indispensable for photoautotrophic growth, CO2 fixation, and H2 photoproduction in Chlamydomonas reinhardtii.
Characterization of mutants with alterations of the phosphorylation site in the D2 photosystem II polypeptide of chlamydomonas reinhardtii.
Insertion of the N-terminal part of PsaF from Chlamydomonas reinhardtii into photosystem I from Synechococcus elongatus enables efficient binding of algal plastocyanin and cytochrome c6.
The argininosuccinate lyase gene of Chlamydomonas reinhardtii: cloning of the cDNA and its characterization as a selectable shuttle marker.
1998
Chlamydomonas genetics, a tool for the study of bioenergetic pathways.
The N-terminal domain of PsaF: precise recognition site for binding and fast electron transfer from cytochrome c6 and plastocyanin to photosystem I of Chlamydomonas reinhardtii.
The PsaC subunit of photosystem I provides an essential lysine residue for fast electron transfer to ferredoxin.
Low density membranes are associated with RNA-binding proteins and thylakoids in the chloroplast of Chlamydomonas reinhardtii.
A systematic survey of conserved histidines in the core subunits of Photosystem I by site-directed mutagenesis reveals the likely axial ligands of P700.
1997
Disruption of the plastid ycf10 open reading frame affects uptake of inorganic carbon in the chloroplast of Chlamydomonas.
The chloroplast ycf3 and ycf4 open reading frames of Chlamydomonas reinhardtii are required for the accumulation of the photosystem I complex.
Translation of the chloroplast psbC mRNA is controlled by interactions between its 5' leader and the nuclear loci TBC1 and TBC3 in Chlamydomonas reinhardtii.
Fast electron transfer from cytochrome c6 and plastocyanin to photosystem I of Chlamydomonas reinhardtii requires PsaF.
A nuclear-encoded function essential for translation of the chloroplast psaB mRNA in chlamydomonas.
A large open reading frame (orf1995) in the chloroplast DNA of Chlamydomonas reinhardtii encodes an essential protein.
Targeted mutations in the psaC gene of Chlamydomonas reinhardtii: preferential reduction of FB at low temperature is not accompanied by altered electron flow from photosystem I to ferredoxin.
1996
Post-transcriptional regulation of chloroplast gene expression in Chlamydomonas reinhardtii.
Double strand break-induced recombination in Chlamydomonas reinhardtii chloroplasts.
The chloroplast ycf7 (petL) open reading frame of Chlamydomonas reinhardtii encodes a small functionally important subunit of the cytochrome b6f complex.
EMBO J,
1996 Jul 15;
15
(14): 3498-3506
Selectable marker recycling in the chloroplast.
The bacterial phleomycin resistance gene ble as a dominant selectable marker in Chlamydomonas.
1995
Isolation of a psaF-deficient mutant of Chlamydomonas reinhardtii: efficient interaction of plastocyanin with the photosystem I reaction center is mediated by the PsaF subunit.
A mutant strain of Chlamydomonas reinhardtii lacking the chloroplast photosystem II psbI gene grows photoautotrophically.
Cloning and sequencing of a cDNA clone encoding the photosystem I PsaD subunit from Chlamydomonas reinhardtii.
The trans-spliced intron 1 in the psaA gene of the Chlamydomonas chloroplast: a comparative analysis.
Chlamydomonas reinhardtii as the photosynthetic yeast.
1994
Studies on homologous recombination in the green alga Chlamydomonas reinhardtii.
The 5' leader of a chloroplast mRNA mediates the translational requirements for two nucleus-encoded functions in Chlamydomonas reinhardtii.
Determinants for stability of the chloroplast psbD RNA are located within its short leader region in Chlamydomonas reinhardtii.
The chloroplast ycf8 open reading frame encodes a photosystem II polypeptide which maintains photosynthetic activity under adverse growth conditions.
Directed disruption of the Chlamydomonas chloroplast psbK gene destabilizes the photosystem II reaction center complex.
Complementation of a Chlamydomonas reinhardtii mutant using a genomic cosmid library.
1993
Characterization of the cleavage site and the recognition sequence of the I-CreI DNA endonuclease encoded by the chloroplast ribosomal intron of Chlamydomonas reinhardtii.
1992
Characterization of chlorophyll a/b proteins of photosystem I from Chlamydomonas reinhardtii.
J Biol Chem,
1992 Dec 25;
267
(36): 25714-25721
Genetic analysis of photosynthesis in prokaryotes and lower eukaryotes.
Tentoxin sensitivity of chloroplasts determined by codon 83 of beta subunit of proton-ATPase.
A chloroplast gene is required for the light-independent accumulation of chlorophyll in Chlamydomonas reinhardtii.
Accumulation of chloroplast psbB RNA requires a nuclear factor in Chlamydomonas reinhardtii.
Post-transcriptional steps in the expression of chloroplast genes.
1991
Chloroplast ribosomal intron of Chlamydomonas reinhardtii: in vitro self-splicing, DNA endonuclease activity and in vivo mobility.
Conservation in structure of TOC1 transposons from Chlamydomonas reinhardtii.
Directed chloroplast transformation in Chlamydomonas reinhardtii: insertional inactivation of the psaC gene encoding the iron sulfur protein destabilizes photosystem I.
A small chloroplast RNA may be required for trans-splicing in Chlamydomonas reinhardtii.
A transposon with an unusual LTR arrangement from Chlamydomonas reinhardtii contains an internal tandem array of 76 bp repeats.
Structure and inheritance of sense and anti-sense transcripts from a transposon in the green alga Chlamydomonas reinhardtii.
The herbicide-resistant D1 mutant L275F of Chlamydomonas reinhardtii fails to show the bicarbonate-reversible formate effect on chlorophyll a fluorescence transients.
1990
Trans-splicing mutants of Chlamydomonas reinhardtii.
Instability of a yellow mutation in Chlamydomonas reinhardtii is not due to TOC1 elements.
Chloroplast transit peptides from the green alga Chlamydomonas reinhardtii share features with both mitochondrial and higher plant chloroplast presequences.
1989
Isolation and characterization of cDNA clones encoding photosystem I subunits with molecular masses 11.0, 10.0 and 8.4 kDa from Chlamydomonas reinhardtii.
The argininosuccinate lyase gene of Chlamydomonas reinhardtii: an important tool for nuclear transformation and for correlating the genetic and molecular maps of the ARG7 locus.
Mutation at the Chlamydomonas nuclear NAC2 locus specifically affects stability of the chloroplast psbD transcript encoding polypeptide D2 of PS II.
Characterization of transcribed dispersed repetitive DNAs in the nuclear genome of the green alga Chlamydomonas reinhardtii.
Analysis of the genes of the OEE1 and OEE3 proteins of the photosystem II complex from Chlamydomonas reinhardtii.
Nuclear and chloroplast mutations affect the synthesis or stability of the chloroplast psbC gene product in Chlamydomonas reinhardtii.
Isolation and characterization of cDNA clones encoding the 17.9 and 8.1 kDa subunits of Photosystem I from Chlamydomonas reinhardtii.
Molecular and biophysical analysis of herbicide-resistant mutants of Chlamydomonas reinhardtii: structure-function relationship of the photosystem II D1 polypeptide.
Preparation of chlamydomonas chloroplasts for the in vitro import of polypeptide precursors.
1988
cDNA and deduced amino acid sequences of cytochrome c from Chlamydomonas reinhardtii: unexpected functional and phylogenetic implications.
A transposon with an unusual arrangement of long terminal repeats in the green alga Chlamydomonas reinhardtii.
Mutant phenotypes support a trans-splicing mechanism for the expression of the tripartite psaA gene in the C. reinhardtii chloroplast.
Comparative analysis of the biogenesis of photosystem II in the wild-type and Y-1 mutant of Chlamydomonas reinhardtii.
Nuclear mutations specifically affect the synthesis and/or degradation of the chloroplast-encoded D2 polypeptide of photosystem II in Chlamydomonas reinhardtii.
Function and assembly of photosystem II: genetic and molecular analysis.
1987
Expression of the nuclear gene encoding oxygen-evolving enhancer protein 2 is required for high levels of photosynthetic oxygen evolution in Chlamydomonas reinhardtii.
Expression of the nuclear encoded OEE1 protein is required for oxygen evolution and stability of photosystem II particles in Chlamydomonas reinhardtii.
1986
A mitochondrial presequence can transport a chloroplast-encoded protein into yeast mitochondria.
J Biol Chem,
1986 Sep 5;
261
(25): 11440-11443
Lack of the D2 protein in a Chlamydomonas reinhardtii psbD mutant affects photosystem II stability and D1 expression.
Sequence organization of the chloroplast ribosomal spacer of Chlamydomonas reinhardii: uninterrupted tRNAile and tRNAala genes and extensive secondary structure.
The cleavable pre-sequence of an imported chloroplast protein directs attached polypeptides into yeast mitochondria.
Characterization of photosystem II mutants of Chlamydomonas reinhardii lacking the psbA gene.
1985
Sequence organization of repetitive elements in the flanking regions of the chloroplast ribosomal unit of Chlamydomonas reinhardii.
Nonsense mutations in the Chlamydomonas chloroplast gene that codes for the large subunit of ribulosebisphosphate carboxylase/oxygenase.
Herbicide resistance and cross-resistance: changes at three distinct sites in the herbicide-binding protein.
True reversion of a mutation in the chloroplast gene encoding the large subunit of ribulosebisphosphate carboxylase/oxygenase in Chlamydomonas.
The chloroplast ribosomal intron of Chlamydomonas reinhardii codes for a polypeptide related to mitochondrial maturases.
1984
Chlamydomonas reinhardii gene for the 32 000 mol. wt. protein of photosystem II contains four large introns and is located entirely within the chloroplast inverted repeat.
Sequence homology between the 32K dalton and the D2 chloroplast membrane polypeptides of Chlamydomonas reinhardii.
Herbicide resistance in Chlamydomonas reinhardtii results from a mutation in the chloroplast gene for the 32-kilodalton protein of photosystem II.
Construction and characterization of autonomously replicating plasmids in the green unicellular alga Chlamydomonas reinhardii.
Localization and sequence analysis of chloroplast DNA sequences of Chlamydomonas reinhardii that promote autonomous replication in yeast.
1983
First DNA sequence of a chloroplast mutation: a missense alteration in the ribulosebisphosphate carboxylase large subunit gene.
1982
Sequence of the chloroplast DNA region of Chlamydomonas reinhardii containing the gene of the large subunit of ribulose bisphosphate carboxylase and parts of its flanking genes.
Sequence of the chloroplast 16S rRNA gene and its surrounding regions of Chlamydomonas reinhardii.
Composite structure of the chloroplast 23 S ribosomal RNA genes of Chlamydomonas reinhardii. Evolutionary and functional implications.
Transformation of the green alga Chlamydomonas reinhardii with yeast DNA.
1981
Nucleotide sequence and structure of cytoplasmic 5S RNA and 5.8S RNA of Chlamydomonas reinhardii.
Comparison of the nuclear ribosomal units of five Chlamydomonas species.
1980
Organization of the nuclear ribosomal DNA of Chlamydomonas reinhardii.
Restriction fragments from Chlamydomonas chloroplast DNA.
1979
Characterization of the gene and messenger RNA of the large subunit of ribulose 1,5-diphosphate carboxylase in Chlamydomonas reinhardii.
Structure analysis at the ends of the intervening DNA sequences in the chloroplast 23S ribosomal genes of C. reinhardii.
1978
Restriction endonuclease map of the chloroplast DNA of Chlamydomonas reinhardii.
Localization of 4S RNA genes on the chloroplast genome of Chlamydomonas reinhardii.
Anatomy of the chloroplast ribosomal DNA of Chlamydomonas reinhardii.
Electron microscope analysis of mouse and rabbit globin and immunoglobulin gene sequences.
1975
Circular ribosomal DNA and ribosomal DNA: replication in somatic amphibian cells.
Transposition of R factor genes to bacteriophage lambda.
1974
Ribosomal RNA gene amplification by rolling circles.
The amplified ribosomal DNA of dytiscid beetles.
1972
Cyclization of chloroplast DNA fragments of Chlamydomonas reinhardi.
1971
Transcriptional mapping of ribosomal RNA genes of the chloroplast and nucleus of Chlamydomonas reinhardi.