Antisense non-coding transcription represses the PHO5 model gene at the level of promoter chromatin structure.
Novačić A, Menéndez D, Ljubas J, Barbarić S, Stutz F, Soudet J, Stuparević I. PLoS Genet,2022 Oct 1018(10):
DOI: 10.1371/journal.pgen.1010432

Antisense-mediated repression of SAGA-dependent genes involves the HIR histone chaperone.
Soudet J, Beyrouthy N, Pastucha AM, Maffioletti A, Menéndez D, Bakir Z, Stutz F. Nucleic Acids Res,2022 May 650(8):
DOI: 10.1093/nar/gkac264

Fine Chromatin-Driven Mechanism of Transcription Interference by Antisense Noncoding Transcription. Kaur Gill J., Maffioletti A., García-Molinero V., Stutz F.+, Soudet J.+ Cell Reports. 2020 May 5.  

Regulation of Gene Expression and Replication Initiation by Non-Coding Transcription: A Model Based on Reshaping Nucleosome-Depleted Regions: Influence of Pervasive Transcription on Chromatin Structure. Soudet J, Stutz F. Bioessays. 2019 Nov;4

Noncoding transcription influences the replication initiation program through chromatin regulation. Soudet J, Gill JK, Stutz F. Genome Res. 2018 Nov 6. pii: gr.239582.118. doi: 10.1101/gr.239582.118. 

Elucidation of the DNA end-replication problem in Saccharomyces cerevisiae. Soudet J, Jolivet P, Teixeira MT. Mol Cell. 2014 Mar 20;53(6):954-64.  

Length-dependent processing of telomeres in the absence of telomerase. Fallet E, Jolivet P, Soudet J, Lisby M, Gilson E, Teixeira MT. Nucleic Acids Res. 2014 Apr;42(6):3648-65. 

Human RioK3 is a novel component of cytoplasmic pre-40S pre-ribosomal particles. Baumas K, Soudet J, Caizergues-Ferrer M, Faubladier M, Henry Y, Mougin A. RNA Biol. 2012 Feb;9(2):162-74. 

Immature small ribosomal subunits can engage in translation initiation in Saccharomyces cerevisiae. Soudet J, Gélugne JP, Belhabich-Baumas K, Caizergues-Ferrer M, Mougin A. EMBO J. 2010 Jan 6;29(1):80-92.  

The post-transcriptional steps of eukaryotic ribosome biogenesis. Henras AK, Soudet J, Gérus M, Lebaron S, Caizergues-Ferrer M, Mougin A, Henry Y. Cell Mol Life Sci. 2008 Aug;65(15):2334-59.